Insertion junction: CLIP2.054248_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054248
Chromosome:chromosome 9
Location:987665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402602 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGATTGACGAGAAAGCTGCTAGCAGAAGGGCCGTTATCCCGAGCGGG
Internal bar code:CTTTATTTAAGATCTGCTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1309
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACGTACACAGTCACACG
Suggested primer 2:TCGCTGCTGTGATTCCTGTT