Insertion junction: CLIP2.054251_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054251
Chromosome:chromosome 10
Location:605613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421650 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGGGAAGAGGTAGGGGTTGGACGTGGCGAAGCCGTACGCCAGCCAG
Internal bar code:TGGAAGTAAAATGCTATAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3178
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGACGAGTGGCATTCGA
Suggested primer 2:AGACCACATCGTGCCACATT