Insertion junction: CLIP2.054254_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054254
Chromosome:chromosome 5
Location:2995711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00229754

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCAGATTCAGAGTCTGCTGTCCTAACCACTAGACCACAGGACCACA
Internal bar code:TAGTGTTTTAATACGGAATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2026
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCTTGTTTCACCGACC
Suggested primer 2:TGAAGGGCGTTCCATACCAC