Insertion junction: CLIP2.054256_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054256
Chromosome:chromosome 17
Location:820784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701800 CDS
Cre17.g701809 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCTGGGGTAGTGGCAGCAGGGCAAAGGAGAGCGCGAGCAGTCATCAA
Internal bar code:CGCGGAGTTCAATCCGGTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3529
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGTTCGCATGTTTGGC
Suggested primer 2:AAGTCTAGCCGCGAACACAA