Insertion junction: CLIP2.054256_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054256
Chromosome:chromosome 17
Location:822603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701800 CDS
Cre17.g701809 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTAAGATTACGGCGCAGGGCAGAAGCCTAGCCTTTGACGCTCTGGT
Internal bar code:AATTTTGCCCACATGTTAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2336
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTCTAGCCGCGAACACAA
Suggested primer 2:ACTTGGTTCGCATGTTTGGC