Insertion junction: CLIP2.054271_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054271
Chromosome:chromosome 5
Location:2723547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240400 SOM2 (1 of 2) PTHR11746//PTHR11746:SF104 - O-METHYLTRANSFERASE // O-METHYLTRANSFERASE 10; S-adenosyl-L-methionine-dependent O-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACTTAGACCGTAACTACCGTATGCTACATTTGTTATGACGTTTACTT
Internal bar code:ATTGTGTGAATAAAAGTGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:17.6471
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACACGGCTAGAGATGG
Suggested primer 2:ATGCAGCTTCAGTCGACCAA