Insertion junction: CLIP2.054276_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054276
Chromosome:chromosome 11
Location:4043080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480700 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGGCTGCGGCTGCTGCAGAGGCCTCTGAGGCCGCTACTGCGGCTGC
Internal bar code:ACGCTTTTTGTAAAGGAAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:412
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGTGTGTAGGGTGGG
Suggested primer 2:TGAGGGTGGGGTAGATGGAG