Insertion junction: CLIP2.054277_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.054277
Chromosome:chromosome 8
Location:680698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360450 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACATGCCGAAGCGTAGCGCGTCGAGGGCATGGCGTCCCGCGCCCAG
Internal bar code:AGAGGTGAGGCGGTGCCCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1580
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATCATAGGACAGGCGG
Suggested primer 2:CTTTCGTGCGCCTTGATCAG