Insertion junction: CLIP2.054286_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054286
Chromosome:chromosome 16
Location:7488910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682026 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCGCTGAGGCTCCCAAGGAGCCACGTGGTCATCGTCCTAACTCAG
Internal bar code:TCTTACGGACTTGCTCAATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2245
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCCTCTTGACCTTCTGT
Suggested primer 2:CATGCGGCCTTACTGATTGC