Insertion junction: CLIP2.054293_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054293
Chromosome:chromosome 16
Location:2277810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658750 (1 of 4) PTHR14255//PTHR14255:SF3 - ATP-DEPENDENT PROTEASE CEREBLON // SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAATGAGACGGGCGGGCAGGGCGGATGCCGTGCGCGTGCGTAGGGTGAG
Internal bar code:ACGGATCGGTTATTAGGATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGTGGACAGTCTGTTTA
Suggested primer 2:TGCGAGCCTGTAAAGCATGA