Insertion junction: CLIP2.054300_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054300
Chromosome:chromosome 3
Location:8026945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAACACGCAGGCGCCAGTCAGCTCACCAGTCGGGCACGATGCCGCTGGG
Internal bar code:TGCTGGTGAAATGTGAGGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCGTTGACACTTCCTCG
Suggested primer 2:GCCTGCCCATCAGATAGCAT