Insertion junction: CLIP2.054300_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054300
Chromosome:chromosome 3
Location:8026946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGACTGCACCGGGGTGCATGCGGGTCTGACACGCAAGGGGAATGCTG
Internal bar code:GCTCGCATGGACTTTGCCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2490
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCCCATCAGATAGCAT
Suggested primer 2:TGACCGTTGACACTTCCTCG