Insertion junction: CLIP2.054305_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054305
Chromosome:chromosome 9
Location:3058770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393839 (1 of 21) IPR000679 - Zinc finger, GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCACGCGCAGCCTGGAGGAGGCGGGCGGGCGGGAGTGCGTCGAGTGCG
Internal bar code:TGGGCTAACAAAAGGACTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2996
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCTATGCCCGGTCGTAG
Suggested primer 2:GAGGTCCTGTCGAATACCGG