Insertion junction: CLIP2.054306_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054306
Chromosome:chromosome 17
Location:2517159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715800 (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGGTTCAGGTTCAGGTTCAGGTTCAGTTTTAAGTTCAGGTCAGGGT
Internal bar code:GACTACGTTTGGGATCTCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1773
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGATGCAGGAGTACCTC
Suggested primer 2:TAAACATGTGCGTGCCTTGC