Insertion junction: CLIP2.054307_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054307
Chromosome:chromosome 6
Location:1570163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261123 (1 of 1) IPR000742//IPR001881//IPR003882//IPR009030 - EGF-like domain // EGF-like calcium-binding domain // Pistil-specific extensin-like protein // Insulin-like growth factor binding protein, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCCCACCGCATTGTGCATGCAGAGATCAACGAGTGTCGCGGCTACG
Internal bar code:GGACGCTGGTCGTTAGCTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:152
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCAGGCGTAGGGGTTTT
Suggested primer 2:TCACTACTATGCTCGCTGCG