Insertion junction: CLIP2.054311_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054311
Chromosome:chromosome 7
Location:3254426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334300 TRP6 Transient receptor potential ion channel protein; (1 of 2) PTHR22847//PTHR22847:SF442 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTCGCCGCCGCGGGGCGGGATGAGCGTGCTCATGGCGGAGGTGGCGA
Internal bar code:AATTACGCCAAGCCAACGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2135
LEAP-Seq percent confirming:85.1852
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCACTGGCCTTGACATGG
Suggested primer 2:GCTTGACCTTGTTGGCTGTG