Insertion junction: CLIP2.054311_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054311
Chromosome:chromosome 7
Location:3254447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334300 TRP6 Transient receptor potential ion channel protein; (1 of 2) PTHR22847//PTHR22847:SF442 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAAATGGTGCACAGCGTGCGGGCGGCTGCAGCCATGTAGGTGGTTTG
Internal bar code:CCCGTTATGTCATCTAAGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGACCTTGTTGGCTGTG
Suggested primer 2:TAGCACTGGCCTTGACATGG