Insertion junction: CLIP2.054312_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054312
Chromosome:chromosome 3
Location:8928440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204689 PDE21 (1 of 17) 3.1.4.53 - 3',5'-cyclic-AMP phosphodiesterase / cAMP-specific phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGAAACAACCCACCCATGGCATCCCTGACACCCTCACCTCCTCCACC
Internal bar code:AACGTTTCCGGGACTGGGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5638
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGATCGGGTACGCCAAT
Suggested primer 2:CTGCCTGTACTACTACGCCG