Insertion junction: CLIP2.054312_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054312
Chromosome:chromosome 3
Location:8928446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204689 PDE21 (1 of 17) 3.1.4.53 - 3',5'-cyclic-AMP phosphodiesterase / cAMP-specific phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAAGCAACCAGAGATATGGGGATGACGGACTGGACAAGGGGCCACGT
Internal bar code:GTCTAGGGCCTCGATACAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTGTACTACTACGCCG
Suggested primer 2:CTGTGATCGGGTACGCCAAT