Insertion junction: CLIP2.054313_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054313
Chromosome:chromosome 10
Location:6241752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463250 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTCCTGTTCAGGCGCAGCAGCTGGAAGCGTTGGCGGACCTGCTGCCTG
Internal bar code:TTTAAAGTGTCATAGCGTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACATGACGCCCACCAG
Suggested primer 2:GGAGGAGGAGGAGAAGGAGG