Insertion junction: CLIP2.054316_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054316
Chromosome:chromosome 8
Location:1256381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363650 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTATACCGTACCGTGTGCTCTTATGCATTTGGCGAGCAGGTGCGTGT
Internal bar code:AGGATAACCCCAGATTCCTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:12.9032
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATCTTCACCCACTCCCG
Suggested primer 2:CTTGAAATGCACCCAACGCA