Insertion junction: CLIP2.054323_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054323
Chromosome:chromosome 10
Location:452554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420800 C1d-HC2,FAP46 Flagellar central pair-associated protein 46; (1 of 1) PTHR15977//PTHR15977:SF16 - FAMILY NOT NAMED // E030019B06RIK PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGATGTCTTCACTCGCTCGCCCTTCCCTCTGCGGCCGCGCAGGCGGA
Internal bar code:ATTGTATGACCGATCTCGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTACAGTCATTGCAGGT
Suggested primer 2:GAGTAGGGATGTTACGGGCG