Insertion junction: CLIP2.054330_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054330
Chromosome:chromosome 4
Location:2556038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g222550 (1 of 43) IPR011989 - Armadillo-like helical intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTGCCGTGCCGCCGCATGATGTAAGCACAAGCACACAAGCTCCATGA
Internal bar code:GTCAGTTGGCGTATGATTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCTAGCCCTCTCACTT
Suggested primer 2:TGTGACGGTGATGGTGATGG