Insertion junction: CLIP2.054332_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054332
Chromosome:chromosome 3
Location:4223429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173750 POB19 Proteome of basal body 19; (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGTGCGGAAGATGGCGGCAGGCGAAGACGACGCCAGTGATGGTGCAG
Internal bar code:CGAGCGAGCCCCCGGGCTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1026
LEAP-Seq percent confirming:32.4324
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCATTACGCTGTCGGG
Suggested primer 2:AGTTGGTGAGAGACGTGCAG