Insertion junction: CLIP2.054336_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054336
Chromosome:chromosome 3
Location:2760960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161500 (1 of 1) PTHR23041:SF65 - E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCATGCCCTGCTGCGCCATGGGAGACATCGAGCGTGTGAGCCCGTGGC
Internal bar code:CCGCGGGAGGAGACTATGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4311
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGTGCTTTGCGTTGGC
Suggested primer 2:CACAGCTTGGGTGCACTTTC