Insertion junction: CLIP2.054339_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054339
Chromosome:chromosome 9
Location:2567951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392654 (1 of 3) PF14494 - Domain of unknown function (DUF4436) (DUF4436) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTTACTCATGGCCTCGGGTAAGGCGTATCTTAGCCGGTGGAACCGGG
Internal bar code:GATATCCCTGTTAGTGTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3337
LEAP-Seq percent confirming:34.5455
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCGTCCTGCTGCTTCTT
Suggested primer 2:TCCCAAACATTGCGTTGCAG