Insertion junction: CLIP2.054341_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054341
Chromosome:chromosome 12
Location:3751316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514250 HLM17 (1 of 1) PF08429 - PLU-1-like protein (PLU-1); Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGCACGGCGCGGCCCATCGAGGTGGAGGGGGCGCTGGGCGAGGCGGA
Internal bar code:AATGACTCTTTTATAGCGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGCATGTGTTGAACAG
Suggested primer 2:ATGTGGCTGTGAAGGCTGAG