Insertion junction: CLIP2.054347_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054347
Chromosome:chromosome 13
Location:1874271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575500 (1 of 726) IPR011009 - Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCGGTTCCCCCGCGGGCATTACGGGCAACCGCCGTCCTCTGGAGGAG
Internal bar code:CTAGCTTACTTCTATATGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1899
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGCGGGTGACTAAGCAG
Suggested primer 2:CAAATTTAACGGGGTCGGCC