Insertion junction: CLIP2.054348_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054348
Chromosome:chromosome 13
Location:1533312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572800 TILS1,TILS tRNA-Ile Lysidine synthase, organelle; (1 of 1) 6.3.4.19 - tRNA(Ile)-lysidine synthetase / Isoleucine-specific transfer ribonucleate lysidine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGTCCCCACCGCCAACCCAACCACCAGCCTCGCTACAGGGCACGCCC
Internal bar code:TCATGTATCCGCTAGACAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2942
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTACTACCGGCATCTGG
Suggested primer 2:TGTCGTACAGCGCAGTCTTT