Insertion junction: CLIP2.054350_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054350
Chromosome:chromosome 12
Location:5496267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530050 IPP7 similar to inositol polyphosphate phosphatase; (1 of 2) 3.1.3.36 - Phosphoinositide 5-phosphatase / Type II inositol-1,4,5-trisphosphate 5-phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCTGACCGCGTGCCCACACTCATCACGCCCGCGCAGGAGGTGGAGGT
Internal bar code:TTTGAAGAATCAGGAGAGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1710
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TACACGGACATGGACACTGC
Suggested primer 2:GGGGTGAAGGGATGTGTGAG