Insertion junction: CLIP2.054363_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054363
Chromosome:chromosome 12
Location:2178977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509350 FAP238 Flagellar Associated Protein 238; (1 of 140) IPR002048 - EF-hand domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGCAGAAACTGGACAACCTCAAGCAGAAAGAGGAAGCGCTACGGCA
Internal bar code:TTCATGGATCCGTGTCGCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2185
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCTTGGCCTCGATCTCC
Suggested primer 2:TGCGTAAAAGGCTGGTAGGG