Insertion junction: CLIP2.054365_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054365
Chromosome:chromosome 9
Location:1332342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400500 (1 of 3) PF14494 - Domain of unknown function (DUF4436) (DUF4436) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGGTGCCGTGCAGGCCCATGCGCTCACTCACCTCGTAGGTCATCAAT
Internal bar code:AGTCTGGAGACCGATATCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4643
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTGAGGGAGGTGCATG
Suggested primer 2:TCGTTTCGCTTTGTGTGCAG