Insertion junction: CLIP2.054366_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054366
Chromosome:chromosome 13
Location:4134289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591150 HTA38,HTA22 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTACTCGAGCACAGCAGCCAGGTACACGGGCGCGCCGGCACCGATAC
Internal bar code:GGGTAAAGCTGGCGCGGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2425
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGCAGCCTTCTTAGC
Suggested primer 2:CCTGTTGACCCCCTTCTTCC