Insertion junction: CLIP2.054379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054379
Chromosome:chromosome 16
Location:3739609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683081 (1 of 3) K09858 - SEC-C motif domain protein (K09858) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCGGCTTTACTCAATTTCGACTCGGGCTTGATTCATTGATGTTTATG
Internal bar code:ACAGCCGGCTTAGGTTAGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1499
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTGCCTTGAAGTCGTT
Suggested primer 2:CTCTCCAGAGCCCTACCAGT