Insertion junction: CLIP2.054382_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054382
Chromosome:chromosome 3
Location:7283240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207250 GLN4 (1 of 2) PTHR20852:SF50 - GLUTAMINE SYNTHETASE CYTOSOLIC ISOZYME 1-1-RELATED; Glutamine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCGAAGCCCCAGCCACCGCCTTTCGCAGTTGATACTACCAGCGCTTT
Internal bar code:CAAACGCCGCTTCAGCGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCTGTAGCAGGTATCTG
Suggested primer 2:GCGCATTGGTCAGGTTGTTT