Insertion junction: CLIP2.054384_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054384
Chromosome:chromosome 2
Location:7449208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392319 VSP6 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCATTTGTCAGTCCGTCGTTCCGAGTTAGGAGAAGGTTCTGACGAGT
Internal bar code:TGCTACCAGTGAAACTTGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5215
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGGAACATTGGGACTG
Suggested primer 2:TGGATGTGTCCCGTTGTGAG