Insertion junction: CLIP2.054386_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054386
Chromosome:chromosome 16
Location:981129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648800 (1 of 6) IPR000253//IPR008984 - Forkhead-associated (FHA) domain // SMAD/FHA domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACGCACTGATTGGCGGGGGCGGGCCAATGGAGTACGACAACGGGGCG
Internal bar code:ATTGAAATGATATTATCTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAGGACACCCAGGACTG
Suggested primer 2:TCTCGCGACTTGCTCATGTT