Insertion junction: CLIP2.054387_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054387
Chromosome:chromosome 3
Location:4496162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175750 (1 of 1) PTHR12461:SF2 - JMJC DOMAIN-CONTAINING PROTEIN 7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGATGTGGGTACGGGCGAGGGTTTGGATCACCGGCCCTGGGACCGT
Internal bar code:GTCAAGGAGGGCCCCCGCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:312
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGCTACCACTCGCAAA
Suggested primer 2:AGTGCTAAGTTGCCCCTGAC