Insertion junction: CLIP2.054399_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.054399
Chromosome:chromosome 2
Location:2911231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095050 (1 of 77) IPR012340 - Nucleic acid-binding, OB-fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCACTGCCAGCGCCTACTTATCCAGCGCCGGCGGCGGCGCCGCGCCC
Internal bar code:TAGCTATTTGACTGGAGCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2673
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCAGCTTCTGGAAAGGT
Suggested primer 2:CCGTCGCCAATTGCACATAG