Insertion junction: CLIP2.054399_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054399
Chromosome:chromosome 10
Location:5409869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457297 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGGCGCGATTGCGGGCGCGGTGGCGGGCACAGCTCCTACTGCGGCG
Internal bar code:AATGTGCCTAGTAGATGGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3551
LEAP-Seq percent confirming:99.0826
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATACGCACGAGCAGTCT
Suggested primer 2:CACGGTATTGCGATGCACAG