Insertion junction: CLIP2.054399_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054399
Chromosome:chromosome 10
Location:5409877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457297 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACCATTGCGCCCGCCAACGCGCCCGCGGCCGCGCCCGCCGCCAGCC
Internal bar code:AATGTGCCTAGTAGATGGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3456
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGTATTGCGATGCACAG
Suggested primer 2:CGTATACGCACGAGCAGTCT