Insertion junction: CLIP2.054402_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054402
Chromosome:chromosome 16
Location:3766048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685217 NUP58 Nucleoporin 58; (1 of 1) K14307 - nucleoporin p58/p45 (NUPL1, NUP49) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCGCCGCCGCCCGCTCCCGCGCCGCCCGCACCCGGCGTTCCTGGC
Internal bar code:GATTGGAAGACTTTTCACCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:447
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGATCTCCCACCCCAAC
Suggested primer 2:GCTTCTTGTTGCTGCTGCTT