Insertion junction: CLIP2.054408_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.054408
Chromosome:chromosome 17
Location:2858036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718750 FAP309 EF-Hand Containing Flagellar Associated Protein 309; (1 of 1) IPR001763//IPR002048//IPR011992 - Rhodanese-like domain // EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTGGTTAAGCAACACAGCGACCGTGTAAAGGTGTTGCGGGAGTGAGA
Internal bar code:TACATGGGCAGCGTTATCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:584
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAAGACCCAGAGCAAGCC
Suggested primer 2:AAGGAGTTCAGGCGTGAAGG