Insertion junction: CLIP2.054415_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.054415
Chromosome:chromosome 2
Location:2231047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089850 (1 of 1) IPR000969//IPR013719 - Structure-specific recognition protein // Domain of unknown function DUF1747 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTGGGCGGGTGGGTGTGTGTGAGCGGGTGTGTGTGCATGTGTGTGTG
Internal bar code:CATGGGTACCGCCGATTATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:152
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTCTTCCTCCTCGTCCT
Suggested primer 2:CAGCAGCTGGAGTTCAGTCA