Insertion junction: CLIP2.054429_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054429
Chromosome:plastome
Location:3335
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTATATACTCCAAATTTATTTATATACTCCAAATTTATATACGATATT
Internal bar code:GGCGTCACGTGTCCAGACATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCTCCACTGCCTCCTTC
Suggested primer 2:CCCCTTCGGGCAAGTAAACT