Insertion junction: CLIP2.054431_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054431
Chromosome:chromosome 2
Location:2749285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGACGAGTGATGGTGGCAAGGAACAGGAAACAAGCATGCAAGGACTAC
Internal bar code:CTTTTAAAAGCTCATTCAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4292
LEAP-Seq percent confirming:74.3243
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGCGGGAGTCAAGGGAT
Suggested primer 2:GACCTCAACACAGCTCACGA