Insertion junction: CLIP2.054431_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054431
Chromosome:chromosome 2
Location:2749290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGTAGGATGTCTGCGCTACCGCCTGAGCTGGCTGCCAAGCCTAAGGG
Internal bar code:CCATAGTCATAATATCTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5895
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTCAACACAGCTCACGA
Suggested primer 2:CAAAGCGGGAGTCAAGGGAT