Insertion junction: CLIP2.054437_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054437
Chromosome:chromosome 6
Location:2833319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272000 (1 of 1) PTHR10281//PTHR10281:SF1 - MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED // VACUOLE MEMBRANE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGCCCTGGCTGATGTGGATCGGCTGACGTGGCTGTGGCCAAACCCT
Internal bar code:TGTTATACGGTTGCGGTGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:744
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGGTCTTCAAAGCTCCC
Suggested primer 2:CATCCTATCCCGCATCCCAC