Insertion junction: CLIP2.054437_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054437
Chromosome:chromosome 6
Location:2833320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272000 (1 of 1) PTHR10281//PTHR10281:SF1 - MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED // VACUOLE MEMBRANE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCATGTATGACTAAGCGCATTGTGGTTGGGCGTGGCCCTGGAGTGCA
Internal bar code:TCCAGATGGGCTGTGTCTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTATCCCGCATCCCAC
Suggested primer 2:TCACGGTCTTCAAAGCTCCC