Insertion junction: CLIP2.054438_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.054438
Chromosome:chromosome 17
Location:2548091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715950 (1 of 2) PTHR12775:SF0 - PROTEIN RTF2 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTTGGAGACGGGATGAGGTGTGACACGAGATTGGGCGCGGGCCCTGC
Internal bar code:AAGTGGCTTTTAATTGTAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGAAAGGGATTGAGCCA
Suggested primer 2:GCGGCCAGGACTAAAACTCT